samedi 16 juillet 2011

Searching for matchings with J-L24, L192.2 Haplotypes in YHRD.ORG

I entered the following values in YHRD which corresponds to kit no 112552 in j-l24 project J-L24 Project (L192.2+, L271+)



Result :
  • All Metapopulation: Found 3 of 36449 matching haplotypes [f=8.231×10-5 (95% CI: 1.697×10-5 – 2.405×10-4)] in 3 of 245 populations.





The haplotypes matching are from
- One from Ravenna, Italy
- One from the United Stated (European American)
- One from Bogota, Colombia

Comparison with some L192.2+ known haplotypes from FTDNA J-L24 Project Data:
Kitno
Country
Haplogroup
n  
19  
389i  
389ii  
390  
391  
392  
393  
385  
438  
439  
437  
448  
456  
458  
635  
ygatah4  
YHRD1
Ravenna, North Italy
UNKNOWN
1
15
12
28
24
10
11
12
14,17
9
11
15
19
13
16
21
11
YHRD2
Colombia
UNKNOWN
1
15
12
28
24
10
11
12
14,17
9
11
15
19
13
16
21
12
YHRD3
USA (European)
UNKNOWN
1
15
12
28
24
10
11
12
14,19
9
11
15
19
12
17
21
11
112552
Tunisia
J2a4h2f1(L192,2+,L271+)
1
15
12
28
24
9
11
12
13,15
9
11
15
21
15
15
21
11
164560
Tunisia
J2a4h2f1(L192,2+,L271+)
1
15
12
28
24
10
11
12
13,15
9
10
15
20
15
15

11
132751
USA (North Italy)
J2a4h2f(L192,2+,L271-)
1
15
13
29
24
10
11
12
13,16
9
11
15
21
15
15

11
189339
Armenia
J2a4h2f(L192,2+,L271-)
1
15
13
29
24
10
11
12
13,16
9
11
15
21
15
16

11


YHRD1 and YHRD2 are mismatching in only one marker (ygatah4) out of 17 markers and seem to have recent common ancestor
The YHRD samples are all mismatching with FTDNA samples in the following markers 448,456,458

Comparing with my YDNA own Data Base
This data base has 25760 haplotypes with 2634 Haplotypes belonging to J2* Haplogroup

YHRD1,YHRD2 and YHRD3 closest matches are belonging to J2b2 Haplogroup !
So it seems that they belong to J2b2 Haplogroup


So I adjusted the Search by Adding DYS456=15 an changed to the criteria:

I got the following result:


3 samples from Turkey:

And one sample from China!

Here is the Result Summary
Kitno
Origin
Haplogroup
n  
19
389|1
389|2
390
391
392
393
385a
385b
438
439
437
448
456
458
635
ygatah4
YHRD_01
Ravenna, North Italy
J2b2 (Estimated)
1
15
12
28
24
10
11
12
14
17
9
11
15
19
13
16
21
11
YHRD_02
Colombia
J2b2 (Estimated)
1
15
12
28
24
10
11
12
14
17
9
11
15
19
13
16
21
12
YHRD_03
USA (European)
J2b2 (Estimated)
1
15
12
28
24
10
11
12
14
19
9
11
15
19
12
17
21
11
112552
Tunisia
J2a4h2f1(L192,2+,L271+)
1
15
12
28
24
9
11
12
13
15
9
11
15
21
15
15
21
11
164560
Tunisia
J2a4h2f1(L192,2+,L271+)
1
15
12
28
24
10
11
12
13
15
9
10
15
20
15
15

11
132751
USA (North Italy)
J2a4h2f(L192,2+,L271-)
1
15
13
29
24
10
11
12
13
16
9
11
15
21
15
15

11
189339
Armenia
J2a4h2f(L192,2+,L271-)
1
15
13
29

 
11
12
13
16
9
11
15
21
15
16

11
YHRD_04
J2a4h2 (could be L192.2+)
2
15
12
28
24
10
11
12
13
16
9
12
15
20
15
15
21
12
YHRD_05
Shanxi China (Han)
J2b (Estimated)
1
15
12
28
24
10
11
12
12
18
9
12
15
19
15
15
21
10
YHRD_06
J2a4h2 (could be L192.2+)
1
15
12
28
24
10
11
12
13
17
9
12
15
20
15
15
21
12


YHRD_04 closest matches all belong to J2a4h2(L192.2- and L192.2+)
YHRD_05 closest matches all belong to J2b
YHRD_064 closest matches all belong to J2a4h2 (L192.2- and L192.2+)

Conclusion:
- Some Haplotypes in YHRD which most probably belong to J2b are closely matching with J2a4h2 and J2a4h2f Haplotypes.

- By combining a haplotypes search in YHRD and calculation of Haplotypes mismatches with Haplotypes from a STR data Base , I have estimated the specific haplogroup of each of the haplotypes found.